Transcript: ENSDART00000078148.5 SMC1A-201

Description

structural maintenance of chromosomes 1A [Source:ZFIN;Acc:ZDB-GENE-090506-9]

Location

About this transcript

This transcript has 26 exons, is annotated with 36 domains and features, is associated with 376 variant alleles and maps to 109 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000078148.5	SMC1A-201	3745	1232aa	ENSDARP00000072610.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F0X6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 26, Coding exons: 26, Transcript length: 3,745 bps, Translation length: 1,232 residues

Version

ENSDART00000078148.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.