Transcript: ENSDART00000078128.4 ube3a-201

Description

ubiquitin protein ligase E3A [Source:ZFIN;Acc:ZDB-GENE-041114-190]

Gene Synonyms

im:7140733, zgc:92173

Location

About this transcript

This transcript has 11 exons, is annotated with 24 domains and features, is associated with 76 variant alleles and maps to 169 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000078128.4	ube3a-201	4104	857aa	ENSDARP00000072590.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R4B5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000184053.1	ube3a-203	3858	766aa	ENSDARP00000145962.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8RIT0	-
ENSDART00000129655.3	ube3a-202	865	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 11, Coding exons: 10, Transcript length: 4,104 bps, Translation length: 857 residues

Version

ENSDART00000078128.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.