Transcript: ENSDART00000077868.6 cd68-201

Description

CD68 molecule [Source:ZFIN;Acc:ZDB-GENE-030131-1312]

Location

About this transcript

This transcript has 6 exons, is annotated with 25 domains and features, is associated with 337 variant alleles and maps to 157 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000077868.6	cd68-201	1853	300aa	ENSDARP00000072334.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F3A5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000173750.2	cd68-202	978	300aa	ENSDARP00000142699.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000173873.2	cd68-203	199	66aa	ENSDARP00000142961.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000173874.2	cd68-204	492	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 1,853 bps, Translation length: 300 residues

Version

ENSDART00000077868.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.