Transcript: ENSDART00000077840.6 cmn-201

Description

calymmin [Source:ZFIN;Acc:ZDB-GENE-000208-9]

Location

About this transcript

This transcript has 54 exons, is annotated with 40 domains and features, is associated with 894 variant alleles and maps to 207 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000077840.6	cmn-201	4111	1207aa	ENSDARP00000072306.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9PVF5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000127870.4	cmn-202	470	136aa	ENSDARP00000108898.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 54, Coding exons: 54, Transcript length: 4,111 bps, Translation length: 1,207 residues

Version

ENSDART00000077840.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.