Transcript: ENSDART00000077800.6 tfdp1a-201

Description

transcription factor Dp-1, a [Source:ZFIN;Acc:ZDB-GENE-040426-2883]

Gene Synonyms

tfdp1l, wu:fb94b07, wu:fc52a06, zgc:55487

Location

About this transcript

This transcript has 12 exons, is annotated with 23 domains and features, is associated with 503 variant alleles and maps to 239 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000077800.6	tfdp1a-201	2317	409aa	ENSDARP00000072266.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q803N1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000142347.2	tfdp1a-204	875	229aa	ENSDARP00000112589.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0V229	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000121828.4	tfdp1a-202	749	188aa	ENSDARP00000105214.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0V228	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000140851.2	tfdp1a-203	668	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 12, Coding exons: 11, Transcript length: 2,317 bps, Translation length: 409 residues

Version

ENSDART00000077800.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.