Transcript: ENSDART00000077715.6 si:dkey-25e12.3-201

Description

si:dkey-25e12.3 [Source:ZFIN;Acc:ZDB-GENE-041001-132]

Gene Synonyms

HINT-3, hint3, zgc:136256, zgc:152680, zgc:63558, zgc:77855

Location

About this transcript

This transcript has 5 exons, is annotated with 6 domains and features, is associated with 242 variant alleles and maps to 169 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000077715.6	si:dkey-25e12.3-201	1677	160aa	ENSDARP00000072181.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5PNN8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000135038.2	si:dkey-25e12.3-202	353	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000153169.2	si:dkey-25e12.3-204	765	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000144580.2	si:dkey-25e12.3-203	748	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,677 bps, Translation length: 160 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q5PNN8

Version

ENSDART00000077715.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.