Transcript: ENSDART00000077655.5 mcmbp-201

Description

minichromosome maintenance complex binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-9676]

Gene Synonyms

c10orf119, cb136, sb:cb136, wu:fi19h07, zgc:55981

Location

Chromosome 13: 25,535,043-25,548,882 reverse strand.

About this transcript

This transcript has 16 exons, is annotated with 8 domains and features, is associated with 230 variant alleles and maps to 188 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000055314.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000168099.2	mcmbp-206	6239	631aa	ENSDARP00000130337.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AB32U148 Q803A6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSDART00000135788.3	mcmbp-204	2408	631aa	ENSDARP00000120704.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AB32U148 Q803A6	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSDART00000077655.5	mcmbp-201	2349	631aa	ENSDARP00000072121.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000135712.3	mcmbp-203	621	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000133970.2	mcmbp-202	786	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000143853.2	mcmbp-205	719	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 16, Coding exons: 16, Transcript length: 2,349 bps, Translation length: 631 residues

Version

ENSDART00000077655.5

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Upcoming Ensembl Platform Transition

Transcript: ENSDART00000077655.5 mcmbp-201

Summary

About Us

Get help

Our sister sites

Follow us

Upcoming Ensembl Platform Transition

Favourite species

All species

Recent locations

Transcript: ENSDART00000077655.5 mcmbp-201

Summary

About Us

Get help

Our sister sites

Follow us