Transcript: ENSDART00000077608.6 msrab-201

Description

methionine sulfoxide reductase Ab [Source:ZFIN;Acc:ZDB-GENE-050309-123]

Location

Chromosome 17: 27,335,543-27,382,868 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 13 domains and features, is associated with 1010 variant alleles and maps to 160 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000055270.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000077608.6	msrab-201	3801	267aa	ENSDARP00000072074.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R878	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000191060.1	msrab-204	778	247aa	ENSDARP00000154766.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000186657.1	msrab-203	747	248aa	ENSDARP00000145814.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000155986.2	msrab-202	499	166aa	ENSDARP00000129616.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 3,801 bps, Translation length: 267 residues

Version

ENSDART00000077608.6

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSDART00000077608.6 msrab-201

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSDART00000077608.6 msrab-201

Summary

About Us

Get help

Our sister sites

Follow us