Transcript: ENSDART00000077554.5 FANCC-203

Description

FA complementation group C [Source:ZFIN;Acc:ZDB-GENE-060510-2]

Location

About this transcript

This transcript has 13 exons, is annotated with 9 domains and features, is associated with 651 variant alleles and maps to 161 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000099027.6	FANCC-204	2135	554aa	ENSDARP00000089800.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0V1A9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000077554.5	FANCC-203	1986	518aa	ENSDARP00000072021.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0V1A8	-
ENSDART00000133717.2	FANCC-201	748	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000135964.2	FANCC-202	728	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 1,986 bps, Translation length: 518 residues

Version

ENSDART00000077554.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.