Transcript: ENSDART00000077549.7 ncs1a-201

Description

neuronal calcium sensor 1a [Source:ZFIN;Acc:ZDB-GENE-021220-1]

Gene Synonyms

freq, freqa, ncs-1a, neuronal calcium sensor-1a

Location

About this transcript

This transcript has 7 exons, is annotated with 23 domains and features, is associated with 807 variant alleles and maps to 228 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000170919.3	ncs1a-202	3127	190aa	ENSDARP00000136419.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q804C0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000077549.7	ncs1a-201	1609	169aa	ENSDARP00000072016.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 1,609 bps, Translation length: 169 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000077549.7

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.