Transcript: ENSDART00000077476.7 prox1a-201

Description

prospero homeobox 1a [Source:NCBI gene (formerly Entrezgene);Acc:30679]

Location

About this transcript

This transcript has 5 exons, is annotated with 24 domains and features, is associated with 440 variant alleles and maps to 208 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000077476.7	prox1a-201	3008	739aa	ENSDARP00000071943.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QAE1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000167292.2	prox1a-202	2814	739aa	ENSDARP00000134086.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QAE1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 3,008 bps, Translation length: 739 residues

Version

ENSDART00000077476.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.