Transcript: ENSDART00000077406.6 cdh27-201

Description

cadherin 27 [Source:ZFIN;Acc:ZDB-GENE-141215-13]

Location

About this transcript

This transcript has 17 exons, is annotated with 47 domains and features, is associated with 497 variant alleles and maps to 128 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000077406.6	cdh27-201	2649	813aa	ENSDARP00000071873.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FC11	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000180369.1	cdh27-202	2895	737aa	ENSDARP00000156220.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000184582.1	cdh27-203	2818	731aa	ENSDARP00000156513.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QPF5	-

Summary

Statistics

Exons: 17, Coding exons: 17, Transcript length: 2,649 bps, Translation length: 813 residues

Version

ENSDART00000077406.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Annotation Attributes

RNA-Seq supported only [Definitions]