Transcript: ENSDART00000077307.5 pomt2-201

Description

protein-O-mannosyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1002]

Gene Synonyms

im:7153045, zgc:158749

Location

About this transcript

This transcript has 21 exons, is annotated with 52 domains and features, is associated with 602 variant alleles and maps to 90 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000126273.4	pomt2-202	2881	756aa	ENSDARP00000111637.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q8R9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000077307.5	pomt2-201	2563	756aa	ENSDARP00000071774.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q8R9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000130709.3	pomt2-203	722	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 21, Coding exons: 21, Transcript length: 2,563 bps, Translation length: 756 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: F1Q8R9

Version

ENSDART00000077307.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.