Transcript: ENSDART00000077125.6 APLP2-201

Description

amyloid beta (A4) precursor-like protein 2 [Source:ZFIN;Acc:ZDB-GENE-061009-28]

Location

About this transcript

This transcript has 17 exons, is annotated with 56 domains and features, is associated with 2763 variant alleles and maps to 259 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000077125.6	APLP2-201	5379	764aa	ENSDARP00000071593.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A2BID8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000189471.1	APLP2-202	2709	776aa	ENSDARP00000147863.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8Q4V0	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

Summary

Statistics

Exons: 17, Coding exons: 17, Transcript length: 5,379 bps, Translation length: 764 residues

Version

ENSDART00000077125.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.