Transcript: ENSDART00000076895.2 pgpep1-201

Description

pyroglutamyl-peptidase I [Source:ZFIN;Acc:ZDB-GENE-050522-88]

Gene Synonyms

im:6904079, zgc:109902

Location

About this transcript

This transcript has 6 exons, is annotated with 1 domain and feature, is associated with 570 variant alleles and maps to 142 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000164741.2	pgpep1-202	5806	208aa	ENSDARP00000135997.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q504F8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000076895.2	pgpep1-201	1227	208aa	ENSDARP00000071365.1	Nonsense mediated decay	Q504F8	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 1,227 bps, Translation length: 208 residues

Version

ENSDART00000076895.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.