Transcript: ENSDART00000076600.6 rpe65c-201

Description

retinoid isomerohydrolase RPE65 c [Source:ZFIN;Acc:ZDB-GENE-081104-505]

Gene Synonyms

RPE56c, si:ch211-198n5.12

Location

About this transcript

This transcript has 14 exons, is annotated with 3 domains and features, is associated with 609 variant alleles and maps to 111 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000076600.6	rpe65c-201	1661	532aa	ENSDARP00000071071.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9C3R8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000184147.1	rpe65c-203	1599	532aa	ENSDARP00000153315.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000180419.1	rpe65c-202	906	302aa	ENSDARP00000151304.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 14, Coding exons: 14, Transcript length: 1,661 bps, Translation length: 532 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: A9C3R8

Version

ENSDART00000076600.6

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.