Transcript: ENSDART00000076409.5 ap4s1-202

Description

adaptor related protein complex 4 subunit sigma 1 [Source:ZFIN;Acc:ZDB-GENE-030616-404]

Gene Synonyms

si:dz115o7.1, si:dz234g15.5, zgc:136677

Location

Chromosome 17: 28,704,271-28,705,264 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 7 domains and features, is associated with 133 variant alleles and maps to 149 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000054220.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000061853.8	ap4s1-201	711	146aa	ENSDARP00000061852.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSDART00000135752.3	ap4s1-203	774	115aa	ENSDARP00000121518.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000189874.1	ap4s1-204	435	144aa	ENSDARP00000156083.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q29RE3	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSDART00000076409.5	ap4s1-202	423	140aa	ENSDARP00000070883.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q78AM7	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 423 bps, Translation length: 140 residues

Version

ENSDART00000076409.5

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

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Transcript: ENSDART00000076409.5 ap4s1-202

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Transcript: ENSDART00000076409.5 ap4s1-202

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