Transcript: ENSDART00000076334.4 valopb-201

Description

vertebrate ancient long opsin b [Source:ZFIN;Acc:ZDB-GENE-040724-41]

Gene Synonyms

si:rp71-1c10.4, va2

Location

About this transcript

This transcript has 5 exons, is annotated with 29 domains and features, is associated with 337 variant alleles and maps to 147 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000076334.4	valopb-201	1298	392aa	ENSDARP00000070808.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8YXX6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,298 bps, Translation length: 392 residues

Version

ENSDART00000076334.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.