Transcript: ENSDART00000076293.6 cx23-201

Description

connexin 23 [Source:NCBI gene;Acc:541419]

Gene Synonyms

cx23a, si:dkey-283f18.2, zgc:110620

Location

Chromosome 20: 37,294,112-37,297,352 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 14 domains and features, is associated with 203 variant alleles and maps to 163 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000054150.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000153137.2	cx23-203	1717	207aa	ENSDARP00000127140.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	U3JA75	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000076293.6	cx23-201	780	204aa	ENSDARP00000070770.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5RGL4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000140450.4	cx23-202	648	153aa	ENSDARP00000122953.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5RGL1	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 780 bps, Translation length: 204 residues

Version

ENSDART00000076293.6

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000076293.6 cx23-201

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Transcript: ENSDART00000076293.6 cx23-201

Summary

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