Transcript: ENSDART00000075926.6 scel-202

Description

sciellin [Source:ZFIN;Acc:ZDB-GENE-030616-15]

Gene Synonyms

si:by173d22.2, wu:fc20b10

Location

Chromosome 9: 17,306,162-17,334,658 forward strand.

About this transcript

This transcript has 32 exons, is annotated with 21 domains and features, is associated with 452 variant alleles and maps to 218 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000034677.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000075926.6	scel-202	2393	612aa	ENSDARP00000070406.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8WHU6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000048548.6	scel-201	2316	612aa	ENSDARP00000048547.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8WHU6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000133594.2	scel-203	696	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000147943.2	scel-205	825	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000140458.2	scel-204	222	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 32, Coding exons: 31, Transcript length: 2,393 bps, Translation length: 612 residues

Version

ENSDART00000075926.6

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

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Transcript: ENSDART00000075926.6 scel-202

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Transcript: ENSDART00000075926.6 scel-202

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