Transcript: ENSDART00000075127.6 b2m-201

Description

beta-2-microglobulin [Source:ZFIN;Acc:ZDB-GENE-980526-88]

Gene Synonyms

bwm, wu:fa94c05, wu:fb10a09

Location

Chromosome 4: 12,793,396-12,795,489 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 16 domains and features, is associated with 14 variant alleles and maps to 384 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000053136.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000075127.6	b2m-201	1134	116aa	ENSDARP00000069612.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0UYS1 Q04475	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000189678.1	b2m-205	993	330aa	ENSDARP00000148267.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000192018.1	b2m-206	954	317aa	ENSDARP00000148347.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000131026.3	b2m-202	844	116aa	ENSDARP00000110049.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0UYS1 Q04475	-
ENSDART00000150427.3	b2m-204	782	112aa	ENSDARP00000125475.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000150325.2	b2m-203	363	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 1,134 bps, Translation length: 116 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q04475

Version

ENSDART00000075127.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

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Transcript: ENSDART00000075127.6 b2m-201

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Transcript: ENSDART00000075127.6 b2m-201

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