Transcript: ENSDART00000075096.4 smpdl3a-201

Description

sphingomyelin phosphodiesterase acid like 3A [Source:ZFIN;Acc:ZDB-GENE-050327-61]

Gene Synonyms

si:ch211-199i15.3, zgc:113352

Location

About this transcript

This transcript has 10 exons, is annotated with 16 domains and features, is associated with 625 variant alleles and maps to 153 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000075096.4	smpdl3a-201	1589	441aa	ENSDARP00000069581.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000144768.4	smpdl3a-202	894	210aa	ENSDARP00000116492.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 1,589 bps, Translation length: 441 residues

Version

ENSDART00000075096.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.