Transcript: ENSDART00000075054.6 thada-201

Description

THADA armadillo repeat containing [Source:ZFIN;Acc:ZDB-GENE-050320-49]

Gene Synonyms

CH73-105B23.5, im:7143125, si:ch73-105b23.5, zgc:113068

Location

Chromosome 13: 8,892,784-8,897,105 forward strand.

About this transcript

This transcript has 10 exons, is annotated with 2 domains and features, is associated with 185 variant alleles and maps to 141 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000053082.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000075054.6	thada-201	1574	364aa	ENSDARP00000069539.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000143705.4	thada-203	8442	1919aa	ENSDARP00000122693.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000184774.1	thada-205	6483	1034aa	ENSDARP00000156348.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000183706.1	thada-204	6386	1026aa	ENSDARP00000147779.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000135848.2	thada-202	530	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

Summary

Statistics

Exons: 10, Coding exons: 9, Transcript length: 1,574 bps, Translation length: 364 residues

Version

ENSDART00000075054.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

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Transcript: ENSDART00000075054.6 thada-201

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Transcript: ENSDART00000075054.6 thada-201

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