Transcript: ENSDART00000074802.5 tmem63c-201

Description

transmembrane protein 63C [Source:ZFIN;Acc:ZDB-GENE-120928-2]

Gene Synonyms

si:dkey-120l3.1, si:dkey-7i21.1

Location

Chromosome 17: 44,833,834-44,922,421 forward strand.

About this transcript

This transcript has 21 exons, is annotated with 20 domains and features, is associated with 2070 variant alleles and maps to 171 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000004158.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000156260.3	tmem63c-204	4025	825aa	ENSDARP00000128675.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WEM4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000074802.5	tmem63c-201	2391	796aa	ENSDARP00000069288.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QLF0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000155096.2	tmem63c-203	704	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000154711.2	tmem63c-202	389	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 21, Coding exons: 21, Transcript length: 2,391 bps, Translation length: 796 residues

Version

ENSDART00000074802.5

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSDART00000074802.5 tmem63c-201

Summary

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Transcript: ENSDART00000074802.5 tmem63c-201

Summary

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