Transcript: ENSDART00000074750.7 runx3-201

Description

RUNX family transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-000605-2]

Gene Synonyms

runxb

Location

Chromosome 13: 45,097,895-45,201,300 reverse strand.

About this transcript

This transcript has 8 exons, is annotated with 23 domains and features, is associated with 2305 variant alleles and maps to 78 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000052826.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000180265.1	runx3-205	2204	438aa	ENSDARP00000146778.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AB32T1U3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000161144.2	runx3-203	6070	424aa	ENSDARP00000136974.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9DEA0	-
ENSDART00000138644.3	runx3-202	5881	250aa	ENSDARP00000117722.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000163556.2	runx3-204	2109	424aa	ENSDARP00000141377.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9DEA0	-
ENSDART00000074750.7	runx3-201	1982	438aa	ENSDARP00000069236.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AB32T1U3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000193812.1	runx3-206	1980	438aa	ENSDARP00000155932.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AB32T1U3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 8, Coding exons: 7, Transcript length: 1,982 bps, Translation length: 438 residues

Version

ENSDART00000074750.7

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

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Transcript: ENSDART00000074750.7 runx3-201

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Transcript: ENSDART00000074750.7 runx3-201

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