Transcript: ENSDART00000074458.7 ptpmt1-201

Description

protein tyrosine phosphatase mitochondrial 1 [Source:ZFIN;Acc:ZDB-GENE-070112-272]

Gene Synonyms

im:7137979, zgc:158719

Location

About this transcript

This transcript has 4 exons, is annotated with 10 domains and features, is associated with 2 variant alleles and maps to 334 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000074458.7	ptpmt1-201	1118	183aa	ENSDARP00000068947.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1L293	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000144862.2	ptpmt1-203	994	155aa	ENSDARP00000119173.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QBA4	-
ENSDART00000143017.2	ptpmt1-202	783	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 1,118 bps, Translation length: 183 residues

Version

ENSDART00000074458.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.