Transcript: ENSDART00000073679.6 mmp15a-201

Description

matrix metallopeptidase 15a [Source:ZFIN;Acc:ZDB-GENE-070817-4]

Location

About this transcript

This transcript has 7 exons, is annotated with 9 domains and features, is associated with 2 variant alleles and maps to 245 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000073679.6	mmp15a-201	1580	334aa	ENSDARP00000068169.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QYY1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000146851.2	mmp15a-202	843	200aa	ENSDARP00000120549.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0J9YIY9	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 1,580 bps, Translation length: 334 residues

Version

ENSDART00000073679.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.