Transcript: ENSDART00000067844.6 asgrl1-201

Description

asialoglycoprotein receptor-like 1 [Source:ZFIN;Acc:ZDB-GENE-081105-120]

Location

Chromosome 8: 39,733,278-39,739,640 reverse strand.

About this transcript

This transcript has 8 exons, is annotated with 13 domains and features, is associated with 214 variant alleles and maps to 120 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000046142.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000135422.3	asgrl1-202	1045	270aa	ENSDARP00000121334.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9C461	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000067844.6	asgrl1-201	1345	262aa	ENSDARP00000067843.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9C460	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000147992.2	asgrl1-203	508	127aa	ENSDARP00000118035.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 1,345 bps, Translation length: 262 residues

Version

ENSDART00000067844.6

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000067844.6 asgrl1-201

Summary

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Transcript: ENSDART00000067844.6 asgrl1-201

Summary

About Us

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