Transcript: ENSDART00000067629.5 saa-201

Description

serum amyloid A [Source:ZFIN;Acc:ZDB-GENE-040927-15]

Gene Synonyms

zgc:103580

Location

About this transcript

This transcript has 4 exons, is annotated with 22 domains and features, is associated with 357 variant alleles and maps to 148 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000067629.5	saa-201	638	121aa	ENSDARP00000067628.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q642J9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000158004.2	saa-202	378	121aa	ENSDARP00000138355.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q642J9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 638 bps, Translation length: 121 residues

Version

ENSDART00000067629.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.