Transcript: ENSDART00000067489.7 si:ch211-51e12.7-201

Description

si:ch211-51e12.7 [Source:ZFIN;Acc:ZDB-GENE-030131-8279]

Gene Synonyms

fj64c03, si:ch211-222h17.2, wu:fj64c03, zgc:153016

Location

Chromosome 4: 308,707-317,971 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 8 domains and features, is associated with 548 variant alleles and maps to 244 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000045914.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000067489.7	si:ch211-51e12.7-201	1839	198aa	ENSDARP00000067488.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000131419.3	si:ch211-51e12.7-202	861	169aa	ENSDARP00000117252.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000174021.2	si:ch211-51e12.7-204	693	163aa	ENSDARP00000142999.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000145428.2	si:ch211-51e12.7-203	859	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 1,839 bps, Translation length: 198 residues

Version

ENSDART00000067489.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

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Transcript: ENSDART00000067489.7 si:ch211-51e12.7-201

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Transcript: ENSDART00000067489.7 si:ch211-51e12.7-201

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