Transcript: ENSDART00000067281.6 cry1a-201

Description

cryptochrome circadian regulator 1a [Source:ZFIN;Acc:ZDB-GENE-010426-2]

Gene Synonyms

cry1a, cry1aa, zcry1a, zgc:153885

Location

About this transcript

This transcript has 13 exons, is annotated with 13 domains and features, is associated with 255 variant alleles and maps to 164 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000130692.4	cry1a-202	3301	619aa	ENSDARP00000112452.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4QN37	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000067281.6	cry1a-201	1984	619aa	ENSDARP00000067280.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4QN37	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 1,984 bps, Translation length: 619 residues

Version

ENSDART00000067281.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.