Transcript: ENSDART00000067188.5 DCLRE1C-202

Description

DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-041210-72]

Location

About this transcript

This transcript has 14 exons, is annotated with 17 domains and features, is associated with 406 variant alleles and maps to 184 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000067188.5	DCLRE1C-202	2400	639aa	ENSDARP00000067187.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M9Q5Y8 Q5RGE5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000150253.2	DCLRE1C-201	689	48aa	ENSDARP00000125604.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000139984.2	DCLRE1C-203	880	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 14, Coding exons: 14, Transcript length: 2,400 bps, Translation length: 639 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q5RGE5

Version

ENSDART00000067188.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.