Transcript: ENSDART00000067175.7 PPHLN1-201

Description

periphilin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1873]

Location

Chromosome 4: 13,931,747-13,963,440 forward strand.

About this transcript

This transcript has 11 exons, is annotated with 14 domains and features, is associated with 676 variant alleles and maps to 308 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000045692.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000067175.7	PPHLN1-201	1988	362aa	ENSDARP00000067174.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000184926.1	PPHLN1-207	1225	362aa	ENSDARP00000155051.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000187959.1	PPHLN1-206	1189	350aa	ENSDARP00000147045.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000133596.2	PPHLN1-202	807	164aa	ENSDARP00000114622.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000142466.3	PPHLN1-204	764	228aa	ENSDARP00000113377.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000137549.3	PPHLN1-203	670	175aa	ENSDARP00000125587.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000141742.3	PPHLN1-205	596	156aa	ENSDARP00000116286.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 11, Coding exons: 10, Transcript length: 1,988 bps, Translation length: 362 residues

Version

ENSDART00000067175.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Transcript: ENSDART00000067175.7 PPHLN1-201

Summary

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Transcript: ENSDART00000067175.7 PPHLN1-201

Summary

About Us

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