Transcript: ENSDART00000066980.7 atxn10-201

Description

ataxin 10 [Source:ZFIN;Acc:ZDB-GENE-060503-180]

Location

Chromosome 4: 18,720,785-18,741,990 reverse strand.

About this transcript

This transcript has 11 exons, is annotated with 5 domains and features, is associated with 640 variant alleles and maps to 88 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000008439.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000186518.1	atxn10-203	1704	537aa	ENSDARP00000155678.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000066980.7	atxn10-201	1588	484aa	ENSDARP00000066979.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B3DJT3	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000145747.2	atxn10-202	1278	420aa	ENSDARP00000118734.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 1,588 bps, Translation length: 484 residues

Version

ENSDART00000066980.7

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSDART00000066980.7 atxn10-201

Summary

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Transcript: ENSDART00000066980.7 atxn10-201

Summary

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