Transcript: ENSDART00000066765.5 bmi1a-201

Description

bmi1 polycomb ring finger onco 1a [Source:ZFIN;Acc:ZDB-GENE-030131-224]

Gene Synonyms

bmi1, pcgf4, psc1, wu:fb17g03, wu:fd18f06

Location

About this transcript

This transcript has 10 exons, is annotated with 16 domains and features, is associated with 202 variant alleles and maps to 174 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000129554.4	bmi1a-202	2251	322aa	ENSDARP00000106943.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4I9F7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000066765.5	bmi1a-201	1942	322aa	ENSDARP00000066764.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4I9F7	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000145949.2	bmi1a-203	579	81aa	ENSDARP00000114193.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 10, Coding exons: 9, Transcript length: 1,942 bps, Translation length: 322 residues

Version

ENSDART00000066765.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.