Transcript: ENSDART00000066703.6 RDH10-202

Description

retinol dehydrogenase 10a [Source:ZFIN;Acc:ZDB-GENE-070112-2242]

Gene Synonyms

wu:fb92b11, zgc:158459

Location

About this transcript

This transcript has 6 exons, is annotated with 20 domains and features, is associated with 555 variant alleles and maps to 109 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000066703.6	RDH10-202	2361	339aa	ENSDARP00000066702.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000146790.2	RDH10-203	518	155aa	ENSDARP00000114909.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000135372.2	RDH10-201	749	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 2,361 bps, Translation length: 339 residues

Version

ENSDART00000066703.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.