Transcript: ENSDART00000066546.6 nif3l1-201

Description

NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050706-80]

Gene Synonyms

im:6900987, zgc:110030

Location

About this transcript

This transcript has 7 exons, is annotated with 8 domains and features, is associated with 359 variant alleles and maps to 203 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000066546.6	nif3l1-201	1549	347aa	ENSDARP00000066545.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QAA0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000152514.2	nif3l1-202	926	248aa	ENSDARP00000126991.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	R4GES8	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 1,549 bps, Translation length: 347 residues

Version

ENSDART00000066546.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.