Transcript: ENSDART00000066397.6 phf5a-201

Description

PHD finger protein 5A [Source:ZFIN;Acc:ZDB-GENE-021219-3]

Gene Synonyms

chunp6910, un-named hi1373, unm hi1373

Location

About this transcript

This transcript has 4 exons, is annotated with 334 domains and features, is associated with 236 variant alleles and maps to 228 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000066397.6	phf5a-201	525	110aa	ENSDARP00000066396.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6YMR2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000141346.3	phf5a-202	396	102aa	ENSDARP00000113996.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000144771.2	phf5a-203	769	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 525 bps, Translation length: 110 residues

Version

ENSDART00000066397.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.