Transcript: ENSDART00000066259.5 kcnk1a-201

Description

potassium channel, subfamily K, member 1a [Source:ZFIN;Acc:ZDB-GENE-070620-26]

Location

About this transcript

This transcript has 4 exons, is annotated with 42 domains and features, is associated with 349 variant alleles and maps to 97 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000066259.5	kcnk1a-201	1469	338aa	ENSDARP00000066258.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A5PLK0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000186448.1	kcnk1a-203	1531	338aa	ENSDARP00000156387.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A5PLK0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000133869.2	kcnk1a-202	812	229aa	ENSDARP00000120366.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 1,469 bps, Translation length: 338 residues

Version

ENSDART00000066259.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.