Transcript: ENSDART00000066164.5 plvapb-201

Description

plasmalemma vesicle associated protein b [Source:ZFIN;Acc:ZDB-GENE-060616-96]

Gene Synonyms

Dr.9655, fb11a07, plvap, vsg1, wu:fb11a07, zgc:113451, zgc:136228, zvsg1

Location

About this transcript

This transcript has 5 exons, is annotated with 13 domains and features, is associated with 359 variant alleles and maps to 230 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000066164.5	plvapb-201	2019	409aa	ENSDARP00000066163.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q8W5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000147761.2	plvapb-202	725	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 2,019 bps, Translation length: 409 residues

Version

ENSDART00000066164.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.