Transcript: ENSDART00000065949.8 top1a-201

Description

DNA topoisomerase Ia [Source:ZFIN;Acc:ZDB-GENE-060616-217]

Gene Synonyms

top1l, wu:fc66a02, zgc:136349

Location

About this transcript

This transcript has 21 exons, is annotated with 40 domains and features, is associated with 272 variant alleles and maps to 287 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000065949.8	top1a-201	3795	758aa	ENSDARP00000065948.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1ED17	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000162149.2	top1a-203	759	94aa	ENSDARP00000139289.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000122249.3	top1a-202	580	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 21, Coding exons: 21, Transcript length: 3,795 bps, Translation length: 758 residues

Version

ENSDART00000065949.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.