Transcript: ENSDART00000065941.6 opn1lw1-201

Description

opsin 1 (cone pigments), long-wave-sensitive, 1 [Source:ZFIN;Acc:ZDB-GENE-990604-41]

Gene Synonyms

LC opsin, LWS-1, lws1, rdops, red-sensitive opsin, zfred

Location

About this transcript

This transcript has 6 exons, is annotated with 51 domains and features, is associated with 144 variant alleles and maps to 173 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000065941.6	opn1lw1-201	1699	357aa	ENSDARP00000065940.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0N9N7J4 Q9W6A7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000161664.2	opn1lw1-202	127	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 1,699 bps, Translation length: 357 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9W6A7

Version

ENSDART00000065941.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.