Transcript: ENSDART00000065933.6 ITGB6-202

Description

integrin, beta 6 [Source:ZFIN;Acc:ZDB-GENE-100812-2]

Location

About this transcript

This transcript has 16 exons, is annotated with 54 domains and features, is associated with 890 variant alleles and maps to 188 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000065933.6	ITGB6-202	2988	782aa	ENSDARP00000065932.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QGX0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000192872.1	ITGB6-203	5096	782aa	ENSDARP00000153217.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QGX0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000160488.2	ITGB6-201	847	216aa	ENSDARP00000136814.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 16, Coding exons: 16, Transcript length: 2,988 bps, Translation length: 782 residues

Version

ENSDART00000065933.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.