Transcript: ENSDART00000065411.7 ATG9A-203

Description

ATG9 autophagy related 9 homolog A (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-070209-65]

Location

Chromosome 6: 11,250,033-11,265,576 forward strand.

About this transcript

This transcript has 16 exons, is annotated with 32 domains and features, is associated with 420 variant alleles and maps to 149 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000044551.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000065411.7	ATG9A-203	3116	846aa	ENSDARP00000065410.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QCA8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000193287.1	ATG9A-205	6033	871aa	ENSDARP00000147795.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000186547.1	ATG9A-204	5168	846aa	ENSDARP00000148935.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QCA8	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000132677.3	ATG9A-201	738	162aa	ENSDARP00000113997.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000137122.2	ATG9A-202	539	99aa	ENSDARP00000122261.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 16, Coding exons: 14, Transcript length: 3,116 bps, Translation length: 846 residues

Version

ENSDART00000065411.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Transcript: ENSDART00000065411.7 ATG9A-203

Summary

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Transcript: ENSDART00000065411.7 ATG9A-203

Summary

About Us

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