Transcript: ENSDART00000065366.7 st6gal1-201

Description

ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 [Source:ZFIN;Acc:ZDB-GENE-060322-3]

Gene Synonyms

zgc:136454

Location

Chromosome 21: 31,150,438-31,184,035 forward strand.

About this transcript

This transcript has 8 exons, is annotated with 12 domains and features, is associated with 464 variant alleles and maps to 247 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000044514.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000065366.7	st6gal1-201	1996	484aa	ENSDARP00000065365.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QK50	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000126205.3	st6gal1-202	2121	495aa	ENSDARP00000106374.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QMH5	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000137728.2	st6gal1-203	1004	265aa	ENSDARP00000120920.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 8, Coding exons: 7, Transcript length: 1,996 bps, Translation length: 484 residues

Version

ENSDART00000065366.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

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Transcript: ENSDART00000065366.7 st6gal1-201

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Transcript: ENSDART00000065366.7 st6gal1-201

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