Transcript: ENSDART00000065045.5 prrc1-201

Description

proline-rich coiled-coil 1 [Source:NCBI gene;Acc:474330]

Gene Synonyms

SAG20, fi37a08, id:ibd5136, misty somites, mys, t2gtl20, wu:fi37a08, zgc:103484

Location

About this transcript

This transcript has 9 exons, is annotated with 11 domains and features, is associated with 252 variant alleles and maps to 208 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000065045.5	prrc1-201	2420	435aa	ENSDARP00000065044.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5XJA3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000175513.2	prrc1-202	3452	435aa	ENSDARP00000144236.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286YAK9 Q5XJA3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 9, Coding exons: 8, Transcript length: 2,420 bps, Translation length: 435 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q5XJA3

Version

ENSDART00000065045.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.