Transcript: ENSDART00000064975.5 rbm18-201

Description

RNA binding motif protein 18 [Source:ZFIN;Acc:ZDB-GENE-040426-1764]

Gene Synonyms

zgc:73332

Location

About this transcript

This transcript has 6 exons, is annotated with 12 domains and features, is associated with 1013 variant alleles and maps to 147 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000064975.5	rbm18-201	1576	188aa	ENSDARP00000064974.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6PBM8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000141869.2	rbm18-203	775	127aa	ENSDARP00000123321.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QCC8	-
ENSDART00000141243.2	rbm18-202	797	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 1,576 bps, Translation length: 188 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6PBM8

Version

ENSDART00000064975.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.