Transcript: ENSDART00000064515.5 lrrc57-201

Description

leucine rich repeat containing 57 [Source:ZFIN;Acc:ZDB-GENE-040718-372]

Gene Synonyms

zgc:92240

Location

About this transcript

This transcript has 6 exons, is annotated with 20 domains and features, is associated with 551 variant alleles and maps to 194 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000064515.5	lrrc57-201	1422	238aa	ENSDARP00000064514.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DHL5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000145054.2	lrrc57-202	829	224aa	ENSDARP00000121739.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 1,422 bps, Translation length: 238 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6DHL5

Version

ENSDART00000064515.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.