Transcript: ENSDART00000064376.5 SOD1-202

Description

superoxide dismutase 1, soluble [Source:ZFIN;Acc:ZDB-GENE-990415-258]

Location

About this transcript

This transcript has 5 exons, is annotated with 13 domains and features, is associated with 183 variant alleles and maps to 200 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000064376.5	SOD1-202	773	154aa	ENSDARP00000064375.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B2GRH9 O73872	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000135058.2	SOD1-201	644	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 773 bps, Translation length: 154 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O73872

Version

ENSDART00000064376.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.