Transcript: ENSDART00000064113.5 abt1-201

Description

activator of basal transcription 1 [Source:ZFIN;Acc:ZDB-GENE-050522-127]

Gene Synonyms

im:7139827, zgc:109995

Location

About this transcript

This transcript has 4 exons, is annotated with 13 domains and features, is associated with 242 variant alleles and maps to 183 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000064113.5	abt1-201	1415	305aa	ENSDARP00000064112.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q503Z6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000183334.1	abt1-203	1411	305aa	ENSDARP00000148206.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q503Z6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000131849.2	abt1-202	771	159aa	ENSDARP00000120413.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 1,415 bps, Translation length: 305 residues

Version

ENSDART00000064113.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.